Hi Kytaez,
I had to build a 220V/40A double-pole relay to control my HPS lights, when I was using them. I placed a standard 120v / 24hr. timer onto the 120V relay power cord, and it safely turned the lights 12h on/ 12h off. I figure you could put one system on that, to turn on when the lights come on. Then have another 24h timer offset by 12h, to turn on the secondary system when the lights go out. Each of the aero-systems would need it's own infinite timer to control the nozzle actuation though. I'd like to hear more about your system. I'm assuming that it has a configuration akin to this.
It sounds like you want to accommodate the increased water demand when the lights are on, and reduce the application when they turn off. Sounds like a good idea to me. I have yet to play with the o/o timings. They will depend on the nozzle volume, coverage, demand, and others variables (that I'm sure will surface) like humidity/temperature. From what I have read, if you have complete spray coverage, you can start with a 3s on/ 5min off cycle, and see how your plants do. Personally, I would start heavy, and trim down; over watering is easier to fix than under. Some of the more experienced growers here might provide more empirical knowledge. Hth.
-ZXC