Most of the problem actually comes from our DA, who is an extremely outspoke critic of MMJ, and has essentially said she would like anyone who sells MMJ behind bars.
To me, its not just about "a few bad apples." The DA has made it very clear that the MMJ distribution community in general is a target, and the operation was obviously designed to disrupt that community. They synchronized massive, well publicized, raids all over the county, while designing them to have the maximum shock value possible. For example, they used battering rams against doors that they had the key for, while the staff was rushing to open them for them.
As a result, they managed to reduce the number of dispensaries by a great deal, while causing several "legitimate" organizations to shut down or drastically change their business model. This is an attack on the community as a whole, and needs to be treated as such. If we let the loss of a few "bad apples" go unremarked or support the government's action, we make it easier to disrupt the community in the future, and then we all suffer.